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Looking for filler episodes? View the filler guide.
| # | Title | Aired | Type |
|---|---|---|---|
| 1 | Homecoming | Feb 15, 2007 | Canon |
| 2 | The Akatsuki Makes Its Move | Feb 15, 2007 | Canon |
| 3 | The Results of Training | Feb 22, 2007 | Canon |
| 4 | The Jinchuriki of the Sand | Mar 1, 2007 | Canon |
| 5 | The Kazekage Stands Tall | Mar 15, 2007 | Canon |
| 6 | Mission Cleared | Mar 29, 2007 | Canon |
| 7 | Run, Kankuro | Mar 29, 2007 | Canon |
| 8 | Team Kakashi, Deployed | Apr 12, 2007 | Canon |
| 9 | The Jinchuriki's Tears | Apr 12, 2007 | Canon |
| 10 | Sealing Jutsu: Nine Phantom Dragons | Apr 19, 2007 | Canon |
| 11 | The Medical Ninja's Student | Apr 26, 2007 | Canon |
| 12 | The Retired Granny's Determination | May 3, 2007 | Canon |
| 13 | A Meeting With Destiny | May 10, 2007 | Canon |
| 14 | Naruto's Growth | May 17, 2007 | Canon |
| 15 | The Secret Weapon is Called.... | May 24, 2007 | Canon |
| 16 | The Secret of Jinchuriki | May 31, 2007 | Canon |
| 17 | The Death of Gaara! | Jun 7, 2007 | Canon |
| 18 | Charge Tactic! Button Hook Entry!! | Jun 21, 2007 | Canon |
| 19 | Traps Activate! Team Guy's Enemy | Jul 5, 2007 | Canon |
| 20 | Hiruko vs. Two Kunoichi! | Jul 19, 2007 | Canon |
| 21 | Sasori's Real Face | Jul 26, 2007 | Canon |
| 22 | Chiyo's Secret Skills | Aug 2, 2007 | Canon |
| 23 | Father and Mother | Aug 2, 2007 | Canon |
| 24 | The Third Kazekage | Aug 9, 2007 | Canon |
| 25 | Three Minutes Between Life and Death | Aug 16, 2007 | Canon |
| 26 | Puppet Fight: 10 vs. 100! | Aug 23, 2007 | Canon |
| 27 | Impossible Dream | Aug 30, 2007 | Canon |
| 28 | Beasts: Alive Again! | Sep 13, 2007 | Canon |
| 29 | Kakashi Enlightened! | Sep 27, 2007 | Canon |
| 30 | Aesthetics of an Instant | Sep 27, 2007 | Canon |
| 31 | The Legacy | Oct 18, 2007 | Canon |
| 32 | Return of the Kazekage | Oct 25, 2007 | Canon |
| 33 | The New Target | Nov 8, 2007 | Canon |
| 34 | Formation! New Team Kakashi! | Nov 15, 2007 | Canon |
| 35 | An Unnecessary Addition | Nov 22, 2007 | Canon |
| 36 | The Fake Smile | Nov 29, 2007 | Canon |
| 37 | Untitled | Nov 29, 2007 | Canon |
| 38 | Simulation | Dec 6, 2007 | Canon |
| 39 | The Tenchi Bridge | Dec 13, 2007 | Canon |
| 40 | The Nine-Tails Unleashed | Dec 20, 2007 | Canon |
| 41 | The Top-Secret Mission Begins | Dec 20, 2007 | Canon |
| 42 | Orochimaru vs. Jinchuriki | Jan 10, 2008 | Canon |
| 43 | Sakura's Tears | Jan 17, 2008 | Canon |
| 44 | The Secret of the Battle! | Jan 24, 2008 | Canon |
| 45 | The Consequences of Betrayal | Jan 31, 2008 | Canon |
| 46 | The Unfinished Page | Feb 7, 2008 | Canon |
| 47 | Infiltration: The Den of the Snake! | Feb 14, 2008 | Canon |
| 48 | Bonds | Feb 28, 2008 | Canon |
| 49 | Something Important... | Mar 6, 2008 | Canon |
| 50 | The Picture Book's Story | Mar 13, 2008 | Canon |
| 51 | Reunion | Mar 20, 2008 | Canon |
| 52 | The Power of Uchiha | Mar 20, 2008 | Canon |
| 53 | Title | Apr 3, 2008 | Canon |
| 54 | Nightmare | Apr 3, 2008 | Canon |
| 55 | Wind | Apr 17, 2008 | Canon |
| 56 | Writhe | Apr 24, 2008 | Canon |
| 57 | Robbed of Sleep | May 8, 2008 | Filler |
| 58 | Loneliness | May 8, 2008 | Filler |
| 59 | A New Enemy | May 15, 2008 | Filler |
| 60 | Impermanence | May 22, 2008 | Filler |
| 61 | Contact | May 29, 2008 | Filler |
| 62 | Teammate | Jun 5, 2008 | Filler |
| 63 | The Two Kings | Jun 19, 2008 | Filler |
| 64 | The Jet-Black Signal Fire | Jul 3, 2008 | Filler |
| 65 | Lockdown of Darkness | Jul 3, 2008 | Filler |
| 66 | Revived Souls | Jul 10, 2008 | Filler |
| 67 | Everyone's Struggle to the Death | Jul 24, 2008 | Filler |
| 68 | Moment of Awakening | Jul 31, 2008 | Filler |
| 69 | Despair | Jul 31, 2008 | Filler |
| 70 | Resonance | Aug 7, 2008 | Filler |
| 71 | My Friend | Aug 14, 2008 | Filler |
| 72 | The Quietly Approaching Threat | Aug 21, 2008 | Canon |
| 73 | Akatsuki's Invasion | Aug 28, 2008 | Canon |
| 74 | Under the Starry Sky | Sep 4, 2008 | Canon |
| 75 | The Old Monk's Prayer | Sep 11, 2008 | Canon |
| 76 | The Next Step | Sep 25, 2008 | Canon |
| 77 | Climbing Silver | Sep 25, 2008 | Canon |
| 78 | The Judgment | Oct 2, 2008 | Canon |
| 79 | Unfulfilled Scream | Oct 2, 2008 | Canon |
| 80 | Last Words | Oct 16, 2008 | Canon |
| 81 | Sad News | Oct 23, 2008 | Canon |
| 82 | Team Ten | Oct 30, 2008 | Canon |
| 83 | Target: Locked On | Nov 6, 2008 | Canon |
| 84 | Kakuzu's Abilities | Nov 13, 2008 | Canon |
| 85 | The Terrifying Secret | Nov 20, 2008 | Canon |
| 86 | Shikamaru's Genius | Dec 4, 2008 | Canon |
| 87 | When You Curse Someone, You Dig Your Own Grave | Dec 4, 2008 | Canon |
| 88 | Wind Style: Rasen Shuriken! | Dec 11, 2008 | Canon |
| 89 | The Price of Power | Dec 18, 2008 | Canon |
| 90 | A Shinobi's Determination | Dec 25, 2008 | Canon |
| 91 | Orochimaru's Hideout Discovered | Jan 8, 2009 | Filler |
| 92 | Encounter | Jan 15, 2009 | Filler |
| 93 | Connecting Hearts | Jan 22, 2009 | Filler |
| 94 | A Night of Rain | Jan 29, 2009 | Filler |
| 95 | The Two Charms | Feb 5, 2009 | Filler |
| 96 | The Unseeing Enemy | Feb 12, 2009 | Filler |
| 97 | The Labyrinth of Distorted Reflection | Feb 19, 2009 | Filler |
| 98 | The Target Appears | Feb 26, 2009 | Filler |
| 99 | The Rampaging Tailed Beast | Mar 5, 2009 | Filler |
| 100 | Inside the Mist | Mar 12, 2009 | Filler |